Dr. Abdullah Kahraman

• Deputy director of the Molecular Tumor Profiling lab. • Lead clinical bioinformatician at molecular tumor board meetings. • Setting up IT, bioinformatics infrastructure and NGS analysis pipelines for WGS, WES, CGP, etc. • Developing a precision medicine database with genomic profiles and patient data. • Supporting 2 Ph.D. students, 2 PostDoc and supervising 2 IT expert. • Publishing and presenting at various top conferences, TV channels • Serving as an invited speaker at several seminars.

Clinical Bioinformatician fostering the collaborations between the University Hospital Zurich and University Hospital Geneva. Working on the development of a lab management software for NGS labs, tumor board software, and NGS analysis pipelines for targeted and whole genome/exome sequencing.

- Bioinformatics in Cancer Genomics. Member of the Pan-Cancer Analysis of Whole Genomes project from the International Cancer Genomics Consortium. - Analysed pathogenic alternative splicing defects in over 2800 pan-cancer samples and their impact on protein-protein interactions.

Computational analysis of mass spectrometry based proteomics data for the identification of limited proteolysis (LiP) cleavage sites in complex biological samples.

Data-driven molecular modelling of proteins and protein complexes in large protein-protein interaction networks utilizing interactome and proteomics data.

Computational analysis of the geometrical and physicochemical complementarity in protein ligand binding sites.

Computational analysis of the geometrical and physicochemical complementarity in protein ligand binding sites.

The Geometry and Physicochemistry of Protein Binding Sites and Ligands and their Detection in Electron Density Maps